Gene detail

Detailed information of OS493_001099-T1 in Lophelia pertusa

Genomic Location: scaffold_2:4574877...4589005
NR annotation: KAJ7387756.1, antigen p97 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O93429	Serotransferrin OS=Paralichthys olivaceus OX=8255 GN=tf PE=2 SV=1
Q9R0R1	Melanotransferrin OS=Mus musculus OX=10090 GN=Meltf PE=2 SV=1
P08582	Melanotransferrin OS=Homo sapiens OX=9606 GN=MELTF PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000902 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00405 all species →	Transferrin	Transferrin	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001156 all species →	Domain	Transferrin-like domain	Interproscan
IPR018195 all species →	Binding_site	Transferrin family, iron binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11485 all species →	TRANSFERRIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005576 all species →	Cellular Component	extracellular region	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0005769 all species →	Cellular Component	early endosome	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0006826 all species →	Biological Process	iron ion transport	Interproscan
GO:0055037 all species →	Cellular Component	recycling endosome	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06569	MFI2, CD228; melanoma-associated antigen p97	-	CD molecules	ko04090	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_001099-T1 global co-expression network