Detailed information of OS493_001199-T1 in Lophelia pertusa

Genomic Location: scaffold_2:6323273...6333000
NR annotation: KAJ7387852.1, hypothetical protein OS493_001199 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P48726Serine/threonine-protein phosphatase PP2A catalytic subunit 1 OS=Paramecium tetraurelia OX=5888 GN=Ppn1 PE=3 SV=2
A0CNL9Serine/threonine-protein phosphatase PP2A catalytic subunit 2 OS=Paramecium tetraurelia OX=5888 GN=Ppn2 PE=3 SV=1
Q6BFF6Serine/threonine-protein phosphatase PP2A catalytic subunit 3 OS=Paramecium tetraurelia OX=5888 GN=Ppn3 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005068 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00149
all species →		MetallophosCalcineurin-like phosphoesteraseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006186
all species →		DomainSerine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphataseInterproscan
IPR004843
all species →		DomainCalcineurin-like phosphoesterase domain, ApaH typeInterproscan
IPR050341
all species →		FamilySerine/threonine-protein phosphatase PP1 catalytic subunitInterproscan
IPR029052
all species →		Homologous_superfamilyMetallo-dependent phosphatase-likeInterproscan
IPR018247
all species →		Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR011992
all species →		Homologous_superfamilyEF-hand domain pairInterproscan
IPR002048
all species →		DomainEF-hand domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11668
all species →		SERINE/THREONINE PROTEIN PHOSPHATASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016787
all species →		Molecular Functionhydrolase activityInterproscan
GO:0004722
all species →		Molecular Functionprotein serine/threonine phosphatase activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_001199-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_001199-T1 global co-expression network
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