Detailed information of OS493_001346-T1 in Lophelia pertusa

Genomic Location: scaffold_3:83784...87477
NR annotation: KAJ7381230.1, hypothetical protein OS493_001346 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0049844 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08914
all species →		Myb_DNA-bind_2Rap1 Myb domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039595
all species →		FamilyTE2IP/Rap1Interproscan
IPR015010
all species →		DomainRap1 Myb domainInterproscan
IPR009057
all species →		Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16466
all species →		TELOMERE REPEAT-BINDING FACTOR 2-INTERACTING PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000723
all species →		Biological Processtelomere maintenanceInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0010833
all species →		Biological Processtelomere maintenance via telomere lengtheningInterproscan
GO:0042162
all species →		Molecular Functiontelomeric DNA bindingInterproscan
GO:0070187
all species →		Cellular Componentshelterin complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_001346-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_001346-T1 global co-expression network
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