Detailed information of OS493_001412-T1 in Lophelia pertusa

Genomic Location: scaffold_3:906872...940668
NR annotation: KAJ7381291.1, Nucleolar MIF4G domain-containing protein 1 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9W020Nucleolar MIF4G domain-containing protein 1 homolog OS=Drosophila melanogaster OX=7227 GN=CG9004 PE=2 SV=1
O13971Suppressor of glycerol defect protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sgd1 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003148 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02854
all species →		MIF4GMIF4G domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050781
all species →		FamilyPre-mRNA-splicing factor CWC22Interproscan
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan
IPR003890
all species →		DomainMIF4G-like, type 3Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18034
all species →		CELL CYCLE CONTROL PROTEIN CWF22-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan
GO:0042274
all species →		Biological Processribosomal small subunit biogenesisInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_001412-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_001412-T1 global co-expression network
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