Detailed information of OS493_001495-T1 in Lophelia pertusa

Genomic Location: scaffold_3:2562596...2596874
NR annotation: KAJ7381363.1, hypothetical protein OS493_001495, partial [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q80U62Run domain Beclin-1-interacting and cysteine-rich domain-containing protein OS=Mus musculus OX=10090 GN=Rubcn PE=1 SV=2
Q92622Run domain Beclin-1-interacting and cysteine-rich domain-containing protein OS=Homo sapiens OX=9606 GN=RUBCN PE=1 SV=4
A7E316Protein associated with UVRAG as autophagy enhancer OS=Bos taurus OX=9913 GN=RUBCNL PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004288 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13901
all species →		RH_domRubicon Homology DomainDomainInterproscan
PF21054
all species →		RUBC_PIKBDRubicon, PI3K-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR025258
all species →		DomainRubicon Homology DomainInterproscan
IPR052428
all species →		FamilyAutophagy and Host Defense RegulatorInterproscan
IPR048569
all species →		DomainRubicon, PI3K-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45971
all species →		PHOX (PX) DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0043231
all species →		Cellular Componentintracellular membrane-bounded organelleInterproscan
GO:1901981
all species →		Molecular Functionphosphatidylinositol phosphate bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_001495-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_001495-T1 global co-expression network
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