Detailed information of OS493_001573-T1 in Lophelia pertusa

Genomic Location: scaffold_3:4649525...4652051
NR annotation: KAJ7381437.1, Down syndrome critical region protein 3 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O35075Vacuolar protein sorting-associated protein 26C OS=Mus musculus OX=10090 GN=Vps26c PE=1 SV=1
O14972Vacuolar protein sorting-associated protein 26C OS=Homo sapiens OX=9606 GN=VPS26C PE=1 SV=1
Q5RF33Vacuolar protein sorting-associated protein 26C OS=Pongo abelii OX=9601 GN=VPS26C PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005414 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03643
all species →		Vps26Vacuolar protein sorting-associated protein 26 FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014752
all species →		Homologous_superfamilyArrestin-like, C-terminalInterproscan
IPR028934
all species →		FamilyVacuolar protein sorting protein 26 relatedInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12233
all species →		VACUOLAR PROTEIN SORTING 26 RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005768
all species →		Cellular ComponentendosomeInterproscan
GO:0006886
all species →		Biological Processintracellular protein transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_001573-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_001573-T1 global co-expression network
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