Detailed information of OS493_001643-T1 in Lophelia pertusa

Genomic Location: scaffold_3:7376300...7390755
NR annotation: KAJ7381495.1, Breast cancer anti-estrogen resistance [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q61140Breast cancer anti-estrogen resistance protein 1 OS=Mus musculus OX=10090 GN=Bcar1 PE=1 SV=2
P56945Breast cancer anti-estrogen resistance protein 1 OS=Homo sapiens OX=9606 GN=BCAR1 PE=1 SV=2
Q63767Breast cancer anti-estrogen resistance protein 1 OS=Rattus norvegicus OX=10116 GN=Bcar1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003917 (this species only)
Ubiquitin familyUBD|Other|SH3 · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00018
all species →		SH3_1SH3 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001452
all species →		DomainSH3 domainInterproscan
IPR036028
all species →		Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR037362
all species →		FamilyCAS familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10654
all species →		CAS SCAFFOLDING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0007169
all species →		Biological Processcell surface receptor protein tyrosine kinase signaling pathwayInterproscan
GO:0016477
all species →		Biological Processcell migrationInterproscan
GO:0090527
all species →		Biological Processobsolete actin filament reorganizationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_001643-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_001643-T1 global co-expression network
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