Detailed information of OS493_001889-T1 in Lophelia pertusa

Genomic Location: scaffold_4:2328266...2335340
NR annotation: KAJ7375151.1, hypothetical protein OS493_001889 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001993 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00017
all species →		SH2SH2 domainDomainInterproscan
PF00169
all species →		PHPH domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035848
all species →		FamilySH3 domain-binding protein 2Interproscan
IPR001849
all species →		DomainPleckstrin homology domainInterproscan
IPR000980
all species →		DomainSH2 domainInterproscan
IPR036860
all species →		Homologous_superfamilySH2 domain superfamilyInterproscan
IPR011993
all species →		Homologous_superfamilyPH-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15126
all species →		SH3-BINDINGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0007165
all species →		Biological Processsignal transductionInterproscan
GO:0017124
all species →		Molecular FunctionSH3 domain bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_001889-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_001889-T1 global co-expression network
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