Gene detail

Detailed information of OS493_002088-T1 in Lophelia pertusa

Genomic Location: scaffold_4:4979381...4998077
NR annotation: KAJ7375337.1, KAT8 regulatory NSL complex subunit 2 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

OS493_002088-T1

ATGGCGGAAGTTACAGAGAAACCAAAGAACGAAGATTCAAGTGCCCCAGCCAAAACTGAATCGAAATTAGAACTTCGCCCGCCGCGCAAATTGTGCTGTTACTCGCAGCGAGTTTGCAACTTGGAAATCTTGAAGGGTTTTGACTTTTGCCACAAGCATATCTTGGAAGACAAAGCGAGTCCTTTCAAACCTTGTGACTTCGTTGCCAAGTCAAATGGAAGAAGGTGTCCTAACCCTGCACAAAAGTTGCCTGACAGGGGGAAAAGCTTTTGCATTATTCATACTCGCAAAGCAGAGCTGCGTCGAGCAGTAGAAGAGAGAAGGAAGAGAAGACACCATGATGACAATGAAGGAAGTTATGATGATGATAAAGGGAAAAGAAGGAGAACTTCAAGCTCAAATTCCCAGAAGAGTGATAAACTAGATGGCCATTCCTCAGATGAGGATGGTGTTGGTAGTGGTGATGATTATCTTAAGGTGGACAGCGCATGGCATGGTGACATAGACAGTGATGCCGACTCTGTTGACAGTGAAGAGGAGGACTTCCTCAAGCATGCTGGTGTGTGGACAGTGGAAGAAGCTACAAGGATGTGTCGTGATAAGATGATCAGGCTGCGCTCATTGTACATTTCACAGTTCAAGAGGTTACAACATGTGCTAAAAGAGAGAAGGAGAAAATACTGTCAAGCTATTCAGGCTGAAGAAGTGGAAGAAACAGGAGAGTGCCATTTGACACCAACACAGCTGCTTGGACGTAAACCCCAGCATGAATGTCCTGGCACTGAAGCTCTGCTGCACCGGCAGGCTAAAGAGAAGAAGCAAGGCGGCATAAGCACTCGACAGCAAGGAGCGTCTACCCTACGCTGCACATACTCTCCTGGGGGGAATAGATGTACCGAAAAGGTCTTGCCACTCACCAAACACTGTGTGAAACACATCACACACGACCCTAACCAACTGCTCTTTCAGAAGTGCACATTCCCGCCAAAGGGTGACAGTCATTGTGAACGGAATGTTGCTAAGATCTTTACCCACTCAGCATGCAGACTACATGTAGAGCTGCCTACCGATATGAAAAGGCCTAACATCAGCAATGACCTCCTTGACGCAAAGGAAAGAGCAAAGTTAAGGAAGACCAGAGCGTTAGAGAGCAAAGTAAGTGAAGCGGATGTACCAGAAGCTCTTCAAGAGAAGTCCAGTGCTCTGGTGGCACCGACCACCTCAGGCCAGCCAGATGAGTCAGGACCCGTCACTACTGAACCACCACAACAAGCTTCTGCTTCATCGCTGCCCTCCACGCAGAGCTCCACTCCATCTATCAGCTCTGAAAAAATGGAAGTTGACAACAAAATTGATGAGAAGATTGATGTTGATGTCAATAAATTATCATCAAATTCAGTTCCTACGAAAGCATCTTCTTCTGCAAGCTCGAGCGGGGGACTTCAGAGTATCTCTCCTGGTCTAGCTGCTGCAAGCCTTGTCGCAGTCTGTAGCAGCCCGCAGTTACCGTTTCAAGGTACGCCATTGGCAAGTGTGAGTAGCATACCGCAGTCTTCAGTGACAGATTCCAAGTCATTGCCAAGCGGCAGTGATAAAGCACGAAGTGTCAGTAATGCTCCTTCTGAGGCAAGCAAGGTGGATGTTGATTCGAAAGTGGCTGATGTCAAAGCAGCAGCTGACTTGAAGGACATTAAGGGATCAGAGGCTGCCAAACCCAAGTCTACAAACACTTTCTTACCTGGCGGTAATAACACTCATGCCCAGGCACAGAGGCCGGTCTCTCCTGGGAAACAACCTGAACAGTCGAAAGTCGTATTAAATGTGACTAAACTCAAGCAGGAAGCTAAAGTGCCAGCGTCCACTTCACCGCCTGTCTCCCAAACTACTGCAAAGGCAGCTCCCTCACACGGTACACAAAAAGCTTCCTCAAATACCACATCACAAAATGTAACACAAATTCCACCATTGGAGTCCCCTGAGAAACCTTCGCAGGTTATCTCAAAGAGTGCCTTGCAGGGTACCTTACCGGGTATCGTTCATGAGCCCCAAAAGGCACTTCGCATGAGCCCCCAAAAGGCACCTCACAAGTTCTGTTCATCCGCCCCAATCAACAACGGTCAGTTCCTCAGCCAGACAGCCATTGAAAATCATCAGTGCAAAGCCTTGGTTGCAATTGAAACAGGACAGCCTTTGAAAACTGTCAGTACAAAGCCCTCAACTACAAGCGAAACGACACAGCCTTTGAAAAGCACCAGTGCAAAGCCCTCGATTACAAGCGAAATGGGACAGCCTTTGAAAACTTGTAAAGCCCTCGATTACAAGCGAAACAGGACAGCCATTGAAAACAATCAGCGCAAAGCCCTCGATTACAAGCGAAATGGGACAGCCATTGAAAAGCATCAGTGCAAAGCCCTCGATTACAAGCGAAATGGGACAGCCATTGAAAAGCATCAGTGCAAAGCCCTCGATTACAAGCGAAACAGGACAGCCATTGAAAACAATCAGCGCAAAGCCCTCGATTACAAGCGAAATGGGACAGCCATTGAAAAGCATCAGTGCAAAGCCCTCGACTACAAGCGAAACGGGACAGCCTTTGAAAAGCATCAGTACAAAGCCCTCGATTACAAGCGAGATGCACCGTTCTGCCCCTGTGAAATCTTTCCAGCACTTGCCAGCAGGGATGACTGCAGCAAGCTCCAAGCAGTTCAGAGCAATCACATCAGTAACAAGCAAGGACACGACTAA

Transcript

OS493_002088-T1

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q2NL14	KAT8 regulatory NSL complex subunit 2 OS=Bos taurus OX=9913 GN=KANSL2 PE=2 SV=1
Q6AY70	KAT8 regulatory NSL complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Kansl2 PE=1 SV=2
Q5R802	KAT8 regulatory NSL complex subunit 2 OS=Pongo abelii OX=9601 GN=KANSL2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007302 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13891 all species →	zf-C3Hc3H	Potential DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026316 all species →	Family	KAT8 regulatory NSL complex subunit 2	Interproscan
IPR025927 all species →	Domain	Potential DNA-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13453 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000123 all species →	Cellular Component	histone acetyltransferase complex	Interproscan
GO:0043981 all species →	Biological Process	obsolete histone H4-K5 acetylation	Interproscan
GO:0043982 all species →	Biological Process	obsolete histone H4-K8 acetylation	Interproscan
GO:0043984 all species →	Biological Process	obsolete histone H4-K16 acetylation	Interproscan
GO:0044545 all species →	Cellular Component	NSL complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for OS493_002088-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_002088-T1 global co-expression network