Gene detail

Detailed information of OS493_002270-T1 in Lophelia pertusa

Genomic Location: scaffold_4:7764215...7782426
NR annotation: KAJ7375496.1, hypothetical protein OS493_002270 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A6X919	Protein C-mannosyl-transferase DPY19L1 OS=Mus musculus OX=10090 GN=Dpy19l1 PE=1 SV=1
Q2PZI1	Protein C-mannosyl-transferase DPY19L1 OS=Homo sapiens OX=9606 GN=DPY19L1 PE=1 SV=1
D4AD75	Protein C-mannosyl-transferase DPY19L1 OS=Rattus norvegicus OX=10116 GN=Dpy19l1 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005188 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10034 all species →	Dpy19	Q-cell neuroblast polarisation	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018732 all species →	Family	Dpy-19/Dpy-19-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31488 all species →	DPY-19-LIKE 1, LIKE (H. SAPIENS)	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000030 all species →	Molecular Function	mannosyltransferase activity	Interproscan
GO:0005637 all species →	Cellular Component	nuclear inner membrane	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0018406 all species →	Biological Process	protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24553	DPY19L; C-mannosyltransferase DPY19L	EC:2.4.1.-	Glycosyltransferases	ko01003	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_002270-T1 global co-expression network