Gene detail

Detailed information of OS493_002507-T1 in Lophelia pertusa

Genomic Location: scaffold_5:3252644...3256363
NR annotation: KAJ7365788.1, hypothetical protein OS493_002507 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q54VC0	Probable serine/threonine-protein kinase DDB_G0280461 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0280461 PE=3 SV=1
Q9M342	Wall-associated receptor kinase-like 15 OS=Arabidopsis thaliana OX=3702 GN=WAKL15 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002650 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07714 all species →	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR051302 all species →	Family	Dual Ser/Thr and Tyr Protein Kinase	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR001245 all species →	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46392 all species →	DUAL SERINE/THREONINE AND TYROSINE PROTEIN KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0043066 all species →	Biological Process	negative regulation of apoptotic process	Interproscan
GO:0044344 all species →	Biological Process	cellular response to fibroblast growth factor stimulus	Interproscan
GO:0045743 all species →	Biological Process	positive regulation of fibroblast growth factor receptor signaling pathway	Interproscan
GO:0070374 all species →	Biological Process	positive regulation of ERK1 and ERK2 cascade	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for OS493_002507-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_002507-T1 global co-expression network