Gene detail

Detailed information of OS493_002591-T1 in Lophelia pertusa

Genomic Location: scaffold_5:4958268...4985348
NR annotation: KAJ7365869.1, hypothetical protein OS493_002591 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

OS493_002591-T1

ATGAGAAAAGACATTATTTTCACTTTGTTGCTTATATCAAGCTGTGGTTTCAACAATGGAGAAGAAACAAACTTCAAACTTTGCAAAGGAAAGAGTCATCCATTTAAAAGTACACCACCTTTGGTTTTGAAAATAACTAAAGAGAAATGCGTCAACTGTTTACTACTGGCAAATTGCACAACATACGAGGGCAGTATTCAAATTCAGATCGTGAGGAAGGCAAGTGATGCTGTTATGAAACAACTACGTTTTCCCAAGCTAACAGAAATTACCGGACACTTGTTAGTCTCTTTGGTTTACGGGCAGCGCAGCTTGAAAGAGATTTTTCCAAACCTTGCCGTGATTCGAGGGCGCGAGGTATTCCTTGATTATTCGCTTGTCATTTACGAGAATGACGGCCTTGAGGAAGTGAACCTTCCTTCGCTAACTACGATTCTGGATGGCGGCGTACGTATCGAGAAAAACATCAATTTATGCTATGTTAAGACAATACGATGGAAGTCGATCATGAGAACTATTAATACAGAAGATGACTACTCCCTGGTTTTAAATTCCAACAATAATGATTGCTATGATGCATGCTTCCAAGCTCCTGGAGCGCAGAAAAGATGCCTGCCACCGGCTGGTCACGGCAGCTTAGCGCATCAACAATGCTGGGCTCCGGGAATAAATGAACAAAATGACGATTGCCAATCGCTGTGTGACATGAAGTGTGGTGAATGGGGCTGCTTGAAGAAAAGCAGCCATTTGTGTTGTCACAAACAGTGCCTGGGAGGATGTTTCAGTTTAAACTCTGCACATCACTGTTATGCTTGCAGACGTCTTCGTATGCCAAATGGTGAATGTGTCGAAAAATGCCAGCCCCATCTGTACGAGATTGATGAGTTTAAATGTGTGGAGAAATGCCCTAGAAAATATTTCAAACTTGAAATTCCCGGTAAAAGTATGGAGTGCGTGAAGGTGTGTCCAGCTGGCTACCAACCAGATAAGATCTCAATGTTTACCGGTCCAATTAATTGTTTCAGGTGTAAGGCTGAAAAATGTCCAAGAGTTTGTAAGACCAAAGACAAAACAGACAAAAACACTGATAGTGTTGAAAAACCACCCATTGATTCACTGTCATCTCTGGCTCTGTACAAAGGCTGCACAGAAATTGATGGAAACTTAATCATCAACATAAGAGGAAGTGGTGGTCCAGGTATTGGAACACGACTTGAGGAGAATTTGGGACAAATTGAAAAAGTGAAAGGTTACATTGTGATCCGAGAGTCAGCGTCTCTCAAGTCTTTGAACTTTCTCAAGAATCTGAAGGAAATTAAACCAAAATTACAACCAGTTCTGGTTCCTCCATATGGAAGATTTATACCAGATTTATATAATGACAGATATGCATTGGCTATCCTTGACAACCCTAAACTGGAGGCAATGTGGCCATTTCAGCAGAATCTAACCATCAGCGATGGAGGGATAATGGTGCATTTGAATCCTTACCTGTGTCCTGGCAGGATCAGTCCACTTGTGAATGATATTCTAAAGTGGAACAAGAATGACACCAAGAGAAGCATTGATGTCTCAGACACCACTAATGGAAATGCTATGGCATGTGATGTTCGCAAAATGAATGTGACTTTAGAGGAAGTAAATAGAGCACCAGGATTACGACAATGTAATCCAGTCTGCATGAAAGTGGAATGGGATGAAATTGTCATTAACGATGATTACAGAAATGTATTGTTTTATACTGTGTCTTACAGAGAGGCCCCGAATACAAAGATCACAGAATATGATGATGTGGATGCCTGTAGCAGTGACAGTGAAAATGTCTGGACACGAGTGGACCATGTAGTGGAGACCCCAGAAGTAAATGTCACCAAGCCAAGCAGCTTGGCAACAAAGCCTCGTAAAATTGTCAAGTACATTTCAAAGCTCAAGCCATTTACCCTGTATGCATTTCAAGTCGAGACAGTGGTACTGAGCTCTGAAGGTGCTAAGAGTGATCTGGTGTTTATTCAGACTAAGGAAAGCGTACCATCCCTGCCAGTGGGTCTTGAAGCAAATTACATCAACTCTTCAGCATTGCTTGTCAAGTGGCAGCTTCCATTGTTTCCAAATGGGAACATTACCAAGTTTATTGTAAAGTATGAATCCAGTACCTACTCTCCATGGAAACAGGATTTAAACTGGTGTAATCGGCAGGTTTTTAGCAACAGACTTGGAGTTGATAAGAAGGAGGAAGGAAGCACTGATAAGACTCCTGATGGGAGCTGTAAGGTTAACATAACATGTGACTGTGACAAGGACAAGGAAAAAGACAAACCAGAAAAACAAGCTGCATTGTTTGCAAAGGAGTTCCAAGACAAGTTGTACAAGACGATCTTCACAAAAGACAAAGATGATAATGACCCTCCAACAAACAAATCCATAGTAGCAGCGACCACCCCTGCCACAGGCTCAAATCACACAAACTGTAGTAACGATGCACAGAATCCGTTGTGTCATCCATCAACAGTACCACCGAGTCGCCAAGCAACATCTTCTAAGGAATCAACCACGTCTTCCAAAACAGCCTCAACAAAGCCCACCGTCACACCAACTAAAACTTTTTCTAATGTCACTTTTGTTGTAAATGGGAACGTTAGGAGTGTCACTCTGGCGAAACTGAAACACTTCTCAGACTATACCATCACTGTCTGTGCATGTACAAAAGTTGGTTGTGCGATTGGAAGTTCCTGCGCAGTCACAAAGGGAATGACAAACAAAAATTATACAGCTGACAATCTTGGAGGACCTTTGAAAGTTTCTACTGACAACGTCACTAGAGAATTTTTTCTCTGGTGGCATCCCCCAAAGGACCCCAATGGAATAGTGCTCAAGTATGATATAGAAATATCACTGCAGGACTCCAAAAATGCTTTGACCGAATGCAGAGGAGGCAAAGACGTAACATATCAAGGCAGCATACCCTTTAGCATTGAGGGGAATTATTCTGCTCGTATACGAGCCATTACTCCTGCCGGAAATGGGTCTTGGAGTAATCAAGTGTCCTTCTCGTTAATGCGTAAAGAGGATTCTACAAACCCTCCCATTCAGGAGACAGATTCATTCCCTCTGGGGACAGTCGTGGGTTCTAGCCTTGCTGCCAGTGTTGTGTTTGTGTTAGCGTGTGGTTTTGTGGTGTGGTACATTGCACGTAAGAGATATAAGAGGTACAGCGATGAACAGATTCCAGGTGTATTGTATGCTTCAGTTAACCCGGAATACATGACATCCACTGACGTGTACATTGCTGACGAATGGGAGTTTCCACGAGAGAAGATCAAGCTGATTCGTGAACTAGGAAACGGAGAAGCTGACGACATTACTCCAGATGCCCCTCAACATAGAGTAGCTGTCAAGACTGTAAGTGAAAACGCATCAATACGGGACAGGGTGGAGTTTCTTCAAGAGGCATCTGTTATGAAACAATTCTGCAGTAACCACGTGGTACGGCTATTGGGCGTGGTCTCAGAGGGGCAACCCACCTTAGTTATCATGGAACTGATGGAGCTTGGAGATCTCAAGAACTTCTTACGATCCCGTCGGCCAGGGGAAGGAACACTGCCTCCTCCAACACTTCAAGAACTCCTTCAAATGGCTGGAGAAATTGCAGATGGAATGGCGTACCTTGCGGCCAGGAAATATGTTCACAGAGATCTTGCGGCAAGAAATTGTATGGTAAATTCAGATTTCACAGTTAAAATAGGAGATTTTGGAATGACTCGTGATATTTACGAAACAGACTATTACAGAAAAGGAGGAAAAGGTTTGCTTCCCGTTCGATGGATGGCACCAGAATCATTAAAAGACGGCGTTTTCACAAGTTATAGTGATGTTTGGTCATTTGGTGTGGTAATGTGGGAGATGGCTACACTAGCGTGCCAACCCTACCCTGGAAAGTCAAATGAAGAAGTGCTTAAATATGTGGTGGATGGAGGACTCATGGAGAAACCAGAAGAATGTCCTGAGAGGCTTTATGAAATGATGGCGTTATGCTGGCAGTTCAACGCTAAAGCTCGGCCGACCTTCGTGTACCTGATTAGCATGCTTGAGGACAACTTGTCAGAAGACTTCCGTTTCCTTTCATTCTATCACACTCTTCCAGAAGACCAACTAAAAGGACTGTTAAGCAGTCACTACAAACATAAGAACAGAGCTGAAACAACGGACTCTACTAACAACGTTGAAACTGCAGCTTGA

Transcript

OS493_002591-T1

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q25197	Putative insulin-like peptide receptor OS=Hydra vulgaris OX=6087 GN=HTK7 PE=2 SV=1
Q9PVZ4	Insulin receptor OS=Xenopus laevis OX=8355 GN=insr PE=1 SV=1
O02466	Insulin-like peptide receptor OS=Branchiostoma lanceolatum OX=7740 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002421 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07714 all species →	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF01030 all species →	Recep_L_domain	Receptor L domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR003961 all species →	Domain	Fibronectin type III	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR020635 all species →	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan
IPR036116 all species →	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR050122 all species →	Family	Receptor Tyrosine Kinase	Interproscan
IPR008266 all species →	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR002011 all species →	Conserved_site	Tyrosine-protein kinase, receptor class II, conserved site	Interproscan
IPR036941 all species →	Homologous_superfamily	Receptor L-domain superfamily	Interproscan
IPR001245 all species →	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR009030 all species →	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR000494 all species →	Domain	Receptor L-domain	Interproscan
IPR006212 all species →	Repeat	Furin-like repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24416 all species →	TYROSINE-PROTEIN KINASE RECEPTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004713 all species →	Molecular Function	protein tyrosine kinase activity	Interproscan
GO:0004714 all species →	Molecular Function	transmembrane receptor protein tyrosine kinase activity	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007169 all species →	Biological Process	cell surface receptor protein tyrosine kinase signaling pathway	Interproscan
GO:0007275 all species →	Biological Process	multicellular organism development	Interproscan
GO:0033674 all species →	Biological Process	positive regulation of kinase activity	Interproscan
GO:0043235 all species →	Cellular Component	receptor complex	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for OS493_002591-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_002591-T1 global co-expression network