Detailed information of OS493_002654-T1 in Lophelia pertusa

Genomic Location: scaffold_5:5849982...5853970
NR annotation: KAJ7365923.1, snRNA metabolic process [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5ZK21Integrator complex subunit 14 OS=Gallus gallus OX=9031 GN=INTS14 PE=2 SV=1
Q8R3P6Integrator complex subunit 14 OS=Mus musculus OX=10090 GN=Ints14 PE=1 SV=1
Q66H58Integrator complex subunit 14 OS=Rattus norvegicus OX=10116 GN=Ints14 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008447 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20504
all species →		IntS14_CIntegrator complex subunit 14, alpha-helical domainDomainInterproscan
PF19435
all species →		IntS14_b-barrelIntegrator complex subunit 14, beta-barrel domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039841
all species →		FamilyIntegrator complex subunit 14Interproscan
IPR046471
all species →		DomainIntegrator complex subunit 14, C-terminalInterproscan
IPR045814
all species →		DomainIntegrator complex subunit 14, beta-barrel domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13532
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0032039
all species →		Cellular Componentintegrator complexInterproscan
GO:0034472
all species →		Biological ProcesssnRNA 3'-end processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_002654-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_002654-T1 global co-expression network
TOP