Detailed information of OS493_002679-T1 in Lophelia pertusa

Genomic Location: scaffold_5:6291820...6293659
NR annotation: KAJ7365942.1, mRNA-decapping enzyme subunit 2 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9CYC6m7GpppN-mRNA hydrolase OS=Mus musculus OX=10090 GN=Dcp2 PE=1 SV=2
Q5REQ8m7GpppN-mRNA hydrolase OS=Pongo abelii OX=9601 GN=DCP2 PE=2 SV=1
Q8IU60m7GpppN-mRNA hydrolase OS=Homo sapiens OX=9606 GN=DCP2 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007123 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00293
all species →		NUDIXNUDIX domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000086
all species →		DomainNUDIX hydrolase domainInterproscan
IPR015797
all species →		Homologous_superfamilyNUDIX hydrolase-like domain superfamilyInterproscan
IPR020084
all species →		Conserved_siteNUDIX hydrolase, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23114
all species →		M7GPPPN-MRNA HYDROLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000290
all species →		Biological Processdeadenylation-dependent decapping of nuclear-transcribed mRNAInterproscan
GO:0000932
all species →		Cellular ComponentP-bodyInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0050072
all species →		Molecular Functionobsolete m7G(5')pppN diphosphatase activityInterproscan
GO:0016787
all species →		Molecular Functionhydrolase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_002679-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_002679-T1 global co-expression network
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