Detailed information of OS493_002736-T1 in Lophelia pertusa

Genomic Location: scaffold_5:7263560...7265000
NR annotation: KAJ7365994.1, hypothetical protein OS493_002736 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P39615Uracil-DNA glycosylase OS=Bacillus subtilis (strain 168) OX=224308 GN=ung PE=1 SV=1
Q65DN9Uracil-DNA glycosylase OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46) OX=279010 GN=ung PE=3 SV=1
A7ZA24Uracil-DNA glycosylase OS=Bacillus velezensis (strain DSM 23117 / BGSC 10A6 / LMG 26770 / FZB42) OX=326423 GN=ung PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001192 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03167
all species →		UDGUracil DNA glycosylase superfamilyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005122
all species →		DomainUracil-DNA glycosylase-likeInterproscan
IPR036895
all species →		Homologous_superfamilyUracil-DNA glycosylase-like domain superfamilyInterproscan
IPR002043
all species →		FamilyUracil-DNA glycosylase family 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11264
all species →		URACIL-DNA GLYCOSYLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004844
all species →		Molecular Functionuracil DNA N-glycosylase activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan
GO:0006284
all species →		Biological Processbase-excision repairInterproscan
GO:0097510
all species →		Biological Processbase-excision repair, AP site formation via deaminated base removalInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K03648UNG, UDG; uracil-DNA glycosylaseEC:3.2.2.27
DNA repair and recombination proteinsko03400deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_002736-T1 global co-expression network
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