Detailed information of OS493_002778-T1 in Lophelia pertusa

Genomic Location: scaffold_6:225277...226739
NR annotation: KAJ7340055.1, Transmembrane protein 87A [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8BKU8Transmembrane protein 87B OS=Mus musculus OX=10090 GN=Tmem87b PE=2 SV=1
Q28EW0Transmembrane protein 87A OS=Xenopus tropicalis OX=8364 GN=tmem87a PE=2 SV=1
Q96K49Transmembrane protein 87B OS=Homo sapiens OX=9606 GN=TMEM87B PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003107 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06814
all species →		Lung_7-TM_RLung seven transmembrane receptorFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009637
all species →		FamilyTransmembrane protein GPR107/GPR108-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21229
all species →		LUNG SEVEN TRANSMEMBRANE RECEPTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0005794
all species →		Cellular ComponentGolgi apparatusInterproscan
GO:0006810
all species →		Biological ProcesstransportInterproscan
GO:0042147
all species →		Biological Processretrograde transport, endosome to GolgiInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_002778-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_002778-T1 global co-expression network
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