Detailed information of OS493_002876-T1 in Lophelia pertusa

Genomic Location: scaffold_6:1608744...1610150
NR annotation: KAJ7340149.1, Inward rectifier potassium channel [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
F1NHE9ATP-sensitive inward rectifier potassium channel 12 OS=Gallus gallus OX=9031 GN=KCNJ12 PE=1 SV=1
F1MYR9G protein-activated inward rectifier potassium channel 4 OS=Bos taurus OX=9913 GN=KCNJ5 PE=1 SV=2
Q63664ATP-sensitive inward rectifier potassium channel 8 OS=Rattus norvegicus OX=10116 GN=Kcnj8 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001013 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17655
all species →		IRK_CInward rectifier potassium channel C-terminal domainDomainInterproscan
PF01007
all species →		IRKInward rectifier potassium channel transmembrane domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016449
all species →		FamilyPotassium channel, inwardly rectifying, KirInterproscan
IPR014756
all species →		Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR041647
all species →		DomainInward rectifier potassium channel, C-terminalInterproscan
IPR013518
all species →		Homologous_superfamilyPotassium channel, inwardly rectifying, Kir, cytoplasmicInterproscan
IPR040445
all species →		DomainPotassium channel, inwardly rectifying, transmembrane domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11767
all species →		INWARD RECTIFIER POTASSIUM CHANNELInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005242
all species →		Molecular Functioninward rectifier potassium channel activityInterproscan
GO:0006813
all species →		Biological Processpotassium ion transportInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0034765
all species →		Biological Processregulation of monoatomic ion transmembrane transportInterproscan
GO:1990573
all species →		Biological Processpotassium ion import across plasma membraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_002876-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_002876-T1 global co-expression network
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