Detailed information of OS493_002907-T1 in Lophelia pertusa

Genomic Location: scaffold_6:2092744...2098341
NR annotation: KAJ7340178.1, hypothetical protein OS493_002907 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9JJ28Protein flightless-1 homolog OS=Mus musculus OX=10090 GN=Flii PE=1 SV=1
Q13045Protein flightless-1 homolog OS=Homo sapiens OX=9606 GN=FLII PE=1 SV=2
F8WK50Protein flightless-1 homolog OS=Danio rerio OX=7955 GN=flii PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003309 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13855
all species →		LRR_8Leucine rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050333
all species →		FamilySmall Leucine-Rich ProteoglycansInterproscan
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan
IPR003591
all species →		RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45712
all species →		AGAP008170-PAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005615
all species →		Cellular Componentextracellular spaceInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_002907-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_002907-T1 global co-expression network
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