Detailed information of OS493_003246-T1 in Lophelia pertusa

Genomic Location: scaffold_6:6854597...6889109
NR annotation: KAJ7340494.1, Integrator complex subunit 1 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8N201Integrator complex subunit 1 OS=Homo sapiens OX=9606 GN=INTS1 PE=1 SV=2
Q6P4S8Integrator complex subunit 1 OS=Mus musculus OX=10090 GN=Ints1 PE=1 SV=2
Q9W1C5Integrator complex subunit 1 OS=Drosophila melanogaster OX=7227 GN=IntS1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003566 (this species only)

 Pfam domain
No Pfam domain signature was detected for OS493_003246-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR038902
all species →		FamilyIntegrator complex subunit 1Interproscan
IPR001313
all species →		RepeatPumilio RNA-binding repeatInterproscan
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21224
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0032039
all species →		Cellular Componentintegrator complexInterproscan
GO:0034474
all species →		Biological ProcessU2 snRNA 3'-end processingInterproscan
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K13138INTS1; integrator complex subunit 1-Spliceosomeko03041deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_003246-T1 global co-expression network
TOP