Detailed information of OS493_003329-T1 in Lophelia pertusa

Genomic Location: scaffold_7:404333...411571
NR annotation: KAJ7393672.1, hypothetical protein OS493_003329 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9YAS43-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) OX=272557 GN=hmgA PE=3 SV=1
Q581163-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=hmgA PE=3 SV=1
O266623-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) OX=187420 GN=hmgA PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0011812 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00368
all species →		HMG-CoA_redHydroxymethylglutaryl-coenzyme A reductaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002202
all species →		FamilyHydroxymethylglutaryl-CoA reductase, class I/IIInterproscan
IPR009029
all species →		Homologous_superfamilyHydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamilyInterproscan
IPR009023
all species →		Homologous_superfamilyHydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10572
all species →		3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004420
all species →		Molecular Functionhydroxymethylglutaryl-CoA reductase (NADPH) activityInterproscan
GO:0015936
all species →		Biological Processcoenzyme A metabolic processInterproscan
GO:0016616
all species →		Molecular Functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptorInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_003329-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_003329-T1 global co-expression network
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