Detailed information of OS493_003381-T1 in Lophelia pertusa

Genomic Location: scaffold_7:836214...839351
NR annotation: KAJ7393722.1, hypothetical protein OS493_003381 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9D0E3LysM and putative peptidoglycan-binding domain-containing protein 1 OS=Mus musculus OX=10090 GN=Lysmd1 PE=1 SV=1
Q5HZA4LysM and putative peptidoglycan-binding domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Lysmd1 PE=1 SV=1
Q9N012LysM and putative peptidoglycan-binding domain-containing protein 1 OS=Macaca fascicularis OX=9541 GN=LYSMD1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008538 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01476
all species →		LysMLysM domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018392
all species →		DomainLysM domainInterproscan
IPR045030
all species →		FamilyLysM and putative peptidoglycan-binding domain-containing protein 1-4Interproscan
IPR036779
all species →		Homologous_superfamilyLysM domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20932
all species →		LYSM AND PUTATIVE PEPTIDOGLYCAN-BINDING DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
No Gene Ontology signature was detected for OS493_003381-T1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_003381-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_003381-T1 global co-expression network
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