Detailed information of OS493_003602-T1 in Lophelia pertusa

Genomic Location: scaffold_7:3555719...3561126
NR annotation: KAJ7393933.1, Protein prune 2 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q0IHU9Protein prune homolog 2 OS=Xenopus tropicalis OX=8364 GN=Prune2 PE=2 SV=1
Q5BJR4Protein prune homolog 2 OS=Rattus norvegicus OX=10116 GN=Prune2 PE=1 SV=1
Q5R4Q8Protein prune homolog 2 OS=Pongo abelii OX=9601 GN=PRUNE2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006456 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12496
all species →		BNIP2Bcl2-/adenovirus E1B nineteen kDa-interacting protein 2FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036865
all species →		Homologous_superfamilyCRAL-TRIO lipid binding domain superfamilyInterproscan
IPR022181
all species →		FamilyBcl2-/adenovirus E1B 19kDa-interacting protein 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12112
all species →		BNIP - RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_003602-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_003602-T1 global co-expression network
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