Detailed information of OS493_003740-T1 in Lophelia pertusa

Genomic Location: scaffold_7:5464502...5465602
NR annotation: KAJ7394066.1, Tar (HIV-1) RNA binding protein 1 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005153 (this species only)

 Pfam domain
No Pfam domain signature was detected for OS493_003740-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR045330
all species →		FamilyProbable methyltransferase Trm3/TARBP1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12029
all species →		RNA METHYLTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016423
all species →		Molecular FunctiontRNA (guanine) methyltransferase activityInterproscan
GO:0030488
all species →		Biological ProcesstRNA methylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_003740-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_003740-T1 global co-expression network
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