Detailed information of OS493_004316-T1 in Lophelia pertusa

Genomic Location: scaffold_8:4995870...4999769
NR annotation: KAJ7387329.1, regulation of skeletal muscle fiber development [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003074 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08495
all species →		FISTFIST N domainDomainInterproscan
PF10442
all species →		FIST_CFIST C domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013702
all species →		DomainFIST domain, N-terminalInterproscan
IPR019494
all species →		DomainFIST, C-domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14939
all species →		F-BOX ONLY PROTEIN 22Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000209
all species →		Biological Processprotein polyubiquitinationInterproscan
GO:0032436
all species →		Biological Processpositive regulation of proteasomal ubiquitin-dependent protein catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10302FBXO22; F-box protein 22-Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_004316-T1 global co-expression network
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