Gene detail

Detailed information of OS493_004445-T1 in Lophelia pertusa

Genomic Location: scaffold_8:6594039...6598720
NR annotation: KAJ7387447.1, Endoplasmic reticulum resident protein 29 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P57759	Endoplasmic reticulum resident protein 29 OS=Mus musculus OX=10090 GN=Erp29 PE=1 SV=2
P52555	Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2
P81623	Endoplasmic reticulum resident protein 29 OS=Bos taurus OX=9913 GN=ERP29 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009128 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07749 all species →	ERp29	Endoplasmic reticulum protein ERp29, C-terminal domain	Domain	Interproscan
PF07912 all species →	ERp29_N	ERp29, N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011679 all species →	Domain	Endoplasmic reticulum resident protein 29, C-terminal	Interproscan
IPR036249 all species →	Homologous_superfamily	Thioredoxin-like superfamily	Interproscan
IPR036356 all species →	Homologous_superfamily	Endoplasmic reticulum resident protein 29, C-terminal domain superfamily	Interproscan
IPR016855 all species →	Family	Endoplasmic reticulum resident protein 29	Interproscan
IPR012883 all species →	Domain	ERp29, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12211 all species →	ENDOPLASMIC RETICULUM PROTEIN ERP29	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0005788 all species →	Cellular Component	endoplasmic reticulum lumen	Interproscan
GO:0009306 all species →	Biological Process	protein secretion	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09586	ERP29; endoplasmic reticulum protein 29	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_004445-T1 global co-expression network