Detailed information of OS493_004494-T1 in Lophelia pertusa

Genomic Location: scaffold_9:678833...683825
NR annotation: KAJ7380910.1, PAX-interacting protein 1 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6ZW49PAX-interacting protein 1 OS=Homo sapiens OX=9606 GN=PAXIP1 PE=1 SV=2
A0JNA8PAX-interacting protein 1 OS=Bos taurus OX=9913 GN=PAXIP1 PE=2 SV=1
Q90WJ3PAX-interacting protein 1 OS=Xenopus laevis OX=8355 GN=paxip1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001384 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16589
all species →		BRCT_2BRCT domain, a BRCA1 C-terminus domainFamilyInterproscan
PF16770
all species →		RTT107_BRCT_5Regulator of Ty1 transposition protein 107 BRCT domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001357
all species →		DomainBRCT domainInterproscan
IPR036420
all species →		Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR051579
all species →		FamilyDNA Damage Response and Transcriptional RegulatorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23196
all species →		PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEINInterproscan

 Gene Ontology
No Gene Ontology signature was detected for OS493_004494-T1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_004494-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_004494-T1 global co-expression network
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