Detailed information of OS493_004595-T1 in Lophelia pertusa

Genomic Location: scaffold_9:2335309...2348096
NR annotation: KAJ7381001.1, Nck-associated protein 1 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A7RU46Nck-associated protein 1 homolog OS=Nematostella vectensis OX=45351 GN=napA PE=3 SV=1
Q9Y2A7Nck-associated protein 1 OS=Homo sapiens OX=9606 GN=NCKAP1 PE=1 SV=1
P28660Nck-associated protein 1 OS=Mus musculus OX=10090 GN=Nckap1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003522 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09735
all species →		Nckap1Nck-associated protein 1FamilyInterproscan
PF11969
all species →		DcpS_CScavenger mRNA decapping enzyme C-term bindingFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036265
all species →		Homologous_superfamilyHIT-like superfamilyInterproscan
IPR019137
all species →		FamilyNck-associated protein 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12093
all species →		NCK-ASSOCIATED PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000902
all species →		Biological Processcell morphogenesisInterproscan
GO:0016477
all species →		Biological Processcell migrationInterproscan
GO:0030031
all species →		Biological Processcell projection assemblyInterproscan
GO:0030866
all species →		Biological Processcortical actin cytoskeleton organizationInterproscan
GO:0031209
all species →		Cellular ComponentSCAR complexInterproscan
GO:0048812
all species →		Biological Processneuron projection morphogenesisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_004595-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_004595-T1 global co-expression network
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