Gene detail

Detailed information of OS493_004751-T1 in Lophelia pertusa

Genomic Location: scaffold_9:4252985...4255462
NR annotation: KAJ7381153.1, 6-phosphogluconolactonase [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

OS493_004751-T1

ATGGCGGCCGCCGACGCGTTTTCAAAGATTTTGTTTCCATCTAAATATCGCAAAATGTGGTGTGTTGCTGCTTATTTCACTTTGCTAGTTGTGCTTTTACTTTCCAGTAGACAAATCTCCGCAAGACACAGTCAACAATCTGAACAGTCTGGGCGAAATGTGACCAATATCGTGTTGATCGGCGCCACCGGTGACCTTGCCAAAAGATATTTGTGGCAAGGATTCTTCAAACTCTTCAACCAAGAAACTAACGATCGAAACATCTTAAAATTCTATCCTGCCGCCCGTGAAGACTTTGAATTAGGTCAAAAGAAGATTGATGCTACCCTAGAAGACTCTTCGACTTTGAAGTGCTCTGAAAGCGAACACTCTTGCACTGACAAGAAGAAAGCGTTTATAAATCAAAGCGTCAAGCAGTATCGCCGTTTAAAAGATGACCATGACTACAAGTCGTTGTGTCAGGTCATTACAGATAATGTGGCAACAGGGGAAAGGGAGCAAGGTCGCATATTCTATCTGTCAGTACCGCCTTTTGCTTACACGCAGATTGCAAATAGGATCGATTCATTCTGTCGCCCGCATAAAGATATTGATATTAAACCAACTTGGATTCGCATTGTGTTCGAGAAGCCCTTTGGCTCCGACTTGGCATCTGCACAGGAGTTATCTCAAAGCTTGGCCAAGTATTTTGACGAAAAAGAAATCTATAGGATTGATCACTATCTTGGTAAAATGGGAGTCGCACAGATCTTAGAGTTTCGCTTCAGTAATCACTACTTATATCAAGATTTGTGGAGTAGAGATCATATAGAGAGGGTCGAGATTGTGTTGAAGGAAAAGAACGATTGTAAAGGAAGAACTAACTTTTATGACCATTATGGTGTTATCCGAGATGTCATGCAAAATCACATGACAGAACTCCTTGTTATGGTTGCCATGGAGATGCCAAACAGCCTTAGCAACAGGACAAGTATCATGCGAAACAAACTAAGGCTTCTAAAAGAGATTAAACCCATGAATAGATGGAGTGGAATTATTGGCCAGTACAAAGACTACAGCATGCACTACCGCCAGGAGAATGGACAAGATAAAAATAGCAATACACCAACATTTGCTGCTGTGTCCGTGTCCATCAACAATGCACGGTGGCATGGTGTTCCTTTTATTTTGGTATCTGGAAAGAAGCTTGAAGAACGCACAGCATATGTGCGGCCAAAATCATTTCATCCACTGACATCTGTGGAAAACAATATGGGAAAACTGTTTGGTTGTTTGGTAAACAATTTTGATGCTTTCATACACAACAGCTCGACTGATGCTTACACAACGCTTATCTCCGCTGTCTATCGCGAGCAAAAAAACTTATTTGTTGGAACTGAAGACCTACTCTCTTCCTGGAAAGTCTGGTCACATTTTCTGGACAGTTTAAATGGTGTAGCTCCTCGTCAGTATGAGCAGGAAAACTTGGATGTGTTAGATTTTGTTACATTAGGAGAAAGACTTGAGTTTTCTTGGAACGATGATGACGGAAGTTGTGATGCAAATGGGATATGTAAATCCCCTAAAATGGCAACCAGCCATGTTTACAAATCAGAGATGTTTAGAAGAAATCCTCTGGTGACTGGAACAAAATCACAAGTTATAAGAACTCTTGCAGACAAAATTATAGGTCATGCTCTTAGAGCTGTCTCTCTGAATGGGGTCTTTAACTTGGCCTTATCGGGAGGCACCTCTCCAATGATGCTCTATGAAACCCTATCTTTTATGGCCAAGGAGTTCCCATGGCAGCACACCCATATATGGCTTGTGGATGAACGATGTGTCCCACTCGACAGCATGGAATCGAATTTCGACTTGATTTACGAGACGCTCTTGAAACATGTGCCTATTTCTCCCTTCAACATTCACCCAATGTACGTCATGTTAAAAGGTGGATTGTGTGATCCAGATGATAGAGGGGCTGAACATTATGAGGCAGAACTCCAGAGGTTTCTCAGCAGCAACCAGTTAGATTTTGTGGTTCTTGGTGTCGGTGTAGATGGACATACAGCATCCCTGTTTCCTCATCAAAGAATTCTAATTGAGACAAACAGATTTATAAGCCTATCAGAAAGTGGTAAAGACTATGGAGTGAAACACAGAATGACTATGACCTTAAGCTTGCTCAACAAGGCCAAAACTTTAGCTGTTCTTGTTCTAGGTGATCAGAAAAAGGATCTAGTGAAAACAGTTTCAAGTGACGATGTTGATGTATGGAACTACCCTGTAACAGGGCTTCAGCCAGATGCAGGAGAATTGACTTGGTACATTGACAATGAAGCTCTTGGTAGTCACTGA

Transcript

OS493_004751-T1

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O95479	GDH/6PGL endoplasmic bifunctional protein OS=Homo sapiens OX=9606 GN=H6PD PE=1 SV=2
Q8CFX1	GDH/6PGL endoplasmic bifunctional protein OS=Mus musculus OX=10090 GN=H6pd PE=1 SV=2
P56201	GDH/6PGL endoplasmic bifunctional protein OS=Oryctolagus cuniculus OX=9986 GN=H6PD PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009484 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01182 all species →	Glucosamine_iso	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase	Domain	Interproscan
PF00479 all species →	G6PD_N	Glucose-6-phosphate dehydrogenase, NAD binding domain	Domain	Interproscan
PF02781 all species →	G6PD_C	Glucose-6-phosphate dehydrogenase, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006148 all species →	Domain	Glucosamine/galactosamine-6-phosphate isomerase	Interproscan
IPR005900 all species →	Domain	6-phosphogluconolactonase, DevB-type	Interproscan
IPR001282 all species →	Family	Glucose-6-phosphate dehydrogenase	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR037171 all species →	Homologous_superfamily	NagB/RpiA transferase-like	Interproscan
IPR022674 all species →	Domain	Glucose-6-phosphate dehydrogenase, NAD-binding	Interproscan
IPR022675 all species →	Domain	Glucose-6-phosphate dehydrogenase, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23429 all species →	GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan
GO:0006098 all species →	Biological Process	pentose-phosphate shunt	Interproscan
GO:0017057 all species →	Molecular Function	6-phosphogluconolactonase activity	Interproscan
GO:0006006 all species →	Biological Process	glucose metabolic process	Interproscan
GO:0016614 all species →	Molecular Function	oxidoreductase activity, acting on CH-OH group of donors	Interproscan
GO:0050661 all species →	Molecular Function	NADP binding	Interproscan
GO:0004345 all species →	Molecular Function	glucose-6-phosphate dehydrogenase activity	Interproscan
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0009051 all species →	Biological Process	pentose-phosphate shunt, oxidative branch	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13937	H6PD; hexose-6-phosphate dehydrogenase	EC:1.1.1.47 EC:3.1.1.31	Pentose phosphate pathway	ko00030	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_004751-T1 global co-expression network