Detailed information of OS493_004799-T1 in Lophelia pertusa

Genomic Location: scaffold_9:4928980...4940591
NR annotation: KAJ7381198.1, B-1 B cell differentiation [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9UDY8Mucosa-associated lymphoid tissue lymphoma translocation protein 1 OS=Homo sapiens OX=9606 GN=MALT1 PE=1 SV=1
Q2TBA3Mucosa-associated lymphoid tissue lymphoma translocation protein 1 homolog OS=Mus musculus OX=10090 GN=Malt1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003196 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00656
all species →		Peptidase_C14Caspase domainDomainInterproscan
PF02883
all species →		Alpha_adaptinC2Adaptin C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011600
all species →		DomainPeptidase C14, caspase domainInterproscan
IPR001309
all species →		DomainPeptidase C14, p20 domainInterproscan
IPR013041
all species →		Homologous_superfamilyClathrin adaptor, appendage, Ig-like subdomain superfamilyInterproscan
IPR008152
all species →		DomainClathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomainInterproscan
IPR029030
all species →		Homologous_superfamilyCaspase-like domain superfamilyInterproscan
IPR052039
all species →		FamilyCaspase-related proteases and regulatorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22576
all species →		MUCOSA ASSOCIATED LYMPHOID TISSUE LYMPHOMA TRANSLOCATION PROTEIN 1/PARACASPASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004197
all species →		Molecular Functioncysteine-type endopeptidase activityInterproscan
GO:0006508
all species →		Biological ProcessproteolysisInterproscan
GO:0006886
all species →		Biological Processintracellular protein transportInterproscan
GO:0016192
all species →		Biological Processvesicle-mediated transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K07369MALT1; mucosa-associated lymphoid tissue lymphoma translocation protein 1EC:3.4.22.-
Peptidases and inhibitorsko01002deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_004799-T1 global co-expression network
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