Detailed information of OS493_004985-T1 in Lophelia pertusa

Genomic Location: scaffold_10:1712325...1715089
NR annotation: KAJ7374646.1, RING finger and SPRY domain-containing protein 1 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8BVR6RING finger and SPRY domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rspry1 PE=1 SV=1
Q96DX4RING finger and SPRY domain-containing protein 1 OS=Homo sapiens OX=9606 GN=RSPRY1 PE=1 SV=1
Q95LP3RING finger and SPRY domain-containing protein 1 OS=Macaca fascicularis OX=9541 GN=RSPRY1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008305 (this species only)

 Pfam domain
No Pfam domain signature was detected for OS493_004985-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR043136
all species →		Homologous_superfamilyB30.2/SPRY domain superfamilyInterproscan
IPR045129
all species →		FamilyE3 ubiquitin-protein ligase RNF123/RSPRY1-likeInterproscan
IPR013320
all species →		Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR001870
all species →		DomainB30.2/SPRY domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13363
all species →		RING FINGER AND SRY DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004842
all species →		Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0051603
all species →		Biological Processproteolysis involved in protein catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_004985-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_004985-T1 global co-expression network
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