Detailed information of OS493_005011-T1 in Lophelia pertusa

Genomic Location: scaffold_10:1896509...1897810
NR annotation: KAJ7374670.1, unfolded protein binding [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9YDK6Thermosome subunit alpha OS=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) OX=272557 GN=thsA PE=3 SV=2
Q2NKZ1T-complex protein 1 subunit eta OS=Bos taurus OX=9913 GN=CCT7 PE=1 SV=1
Q9V2T5Thermosome subunit alpha OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) OX=330779 GN=thsA PE=3 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002319 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00118
all species →		Cpn60_TCP1TCP-1/cpn60 chaperonin familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002423
all species →		FamilyChaperonin Cpn60/GroEL/TCP-1 familyInterproscan
IPR027413
all species →		Homologous_superfamilyGroEL-like equatorial domain superfamilyInterproscan
IPR027409
all species →		Homologous_superfamilyGroEL-like apical domain superfamilyInterproscan
IPR042619
all species →		FamilyBardet-Biedl syndrome 10 proteinInterproscan
IPR027410
all species →		Homologous_superfamilyTCP-1-like chaperonin intermediate domain superfamilyInterproscan
IPR017998
all species →		FamilyChaperone tailless complex polypeptide 1 (TCP-1)Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14667
all species →		BARDET-BIEDL SYNDROME 10 PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0051131
all species →		Biological Processchaperone-mediated protein complex assemblyInterproscan
GO:0140662
all species →		Molecular FunctionATP-dependent protein folding chaperoneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K19401BBS10; Bardet-Biedl syndrome 10 protein-Cilium and associated proteinsko03037deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_005011-T1 global co-expression network
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