Detailed information of OS493_005016-T1 in Lophelia pertusa

Genomic Location: scaffold_10:1949532...1951908
NR annotation: KAJ7374675.1, hypothetical protein OS493_005016 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P28622Endoglucanase 4 OS=Bacillus sp. (strain KSM-522) OX=120046 PE=3 SV=2
Q5YLG1Endoglucanase A OS=Bacillus pumilus OX=1408 GN=eglA PE=1 SV=1
P26221Endoglucanase E-4 OS=Thermobifida fusca OX=2021 GN=celD PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002174 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00759
all species →		Glyco_hydro_9Glycosyl hydrolase family 9RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001701
all species →		DomainGlycoside hydrolase family 9Interproscan
IPR012341
all species →		Homologous_superfamilySix-hairpin glycosidase-like superfamilyInterproscan
IPR008928
all species →		Homologous_superfamilySix-hairpin glycosidase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22298
all species →		ENDO-1,4-BETA-GLUCANASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004553
all species →		Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compoundsInterproscan
GO:0005975
all species →		Biological Processcarbohydrate metabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_005016-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_005016-T1 global co-expression network
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