Detailed information of OS493_005133-T1 in Lophelia pertusa

Genomic Location: scaffold_10:3176127...3177378
NR annotation: KAJ7374783.1, Neuralized-like protein 2 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A1L0Y2Neuralized-like protein 4 OS=Xenopus tropicalis OX=8364 GN=neurl4 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002554 (this species only)
Ubiquitin familyE3|E3 adaptor Cullin RING|SOCS · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07177
all species →
NeuralizedNeuralizedDomainInterproscan
PF07525
all species →
SOCS_boxSOCS boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043136
all species →
Homologous_superfamilyB30.2/SPRY domain superfamilyInterproscan
IPR037962
all species →
FamilyNeuralizedInterproscan
IPR001496
all species →
DomainSOCS box domainInterproscan
IPR036036
all species →
Homologous_superfamilySOCS box-like domain superfamilyInterproscan
IPR006573
all species →
DomainNeuralized homology repeat (NHR) domainInterproscan
IPR037139
all species →
Homologous_superfamilyvon Hippel-Lindau disease tumour suppressor, alpha domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12429
all species →
NEURALIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0061630
all species →
Molecular Functionubiquitin protein ligase activityInterproscan
GO:0035556
all species →
Biological Processintracellular signal transductionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_005133-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_005133-T1 global co-expression network
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