Detailed information of OS493_005137-T1 in Lophelia pertusa

Genomic Location: scaffold_10:3207466...3216591
NR annotation: KAJ7374787.1, positive regulation of hematopoietic stem cell proliferation [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P54253Ataxin-1 OS=Homo sapiens OX=9606 GN=ATXN1 PE=1 SV=2
Q63540Ataxin-1 OS=Rattus norvegicus OX=10116 GN=Atxn1 PE=2 SV=1
P54254Ataxin-1 OS=Mus musculus OX=10090 GN=Atxn1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009780 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08517
all species →		AXHAtaxin-1 and HBP1 module (AXH)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036096
all species →		Homologous_superfamilyAtaxin, AXH domain superfamilyInterproscan
IPR003652
all species →		DomainAtaxin, AXH domainInterproscan
IPR043404
all species →		FamilyATAXIN1-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13392
all species →		ATAXIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K23616ATXN1_1L; ataxin 1/1L-Pathways of neurodegeneration - multiple diseasesko05022deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_005137-T1 global co-expression network
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