Detailed information of OS493_005168-T1 in Lophelia pertusa

Genomic Location: scaffold_10:3529712...3530107
NR annotation: KAJ7374816.1, hypothetical protein OS493_005168 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010784 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00553
all species →		CBM_2Cellulose binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012291
all species →		Homologous_superfamilyCBM2, carbohydrate-binding domain superfamilyInterproscan
IPR008965
all species →		Homologous_superfamilyCBM2/CBM3, carbohydrate-binding domain superfamilyInterproscan
IPR001919
all species →		DomainCarbohydrate-binding type-2 domainInterproscan

 PANTHER
No PANTHER signature was detected for OS493_005168-T1. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0004553
all species →		Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compoundsInterproscan
GO:0030247
all species →		Molecular Functionpolysaccharide bindingInterproscan
GO:0030246
all species →		Molecular Functioncarbohydrate bindingInterproscan
GO:0005975
all species →		Biological Processcarbohydrate metabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_005168-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_005168-T1 global co-expression network
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