Detailed information of OS493_005303-T1 in Lophelia pertusa

Genomic Location: scaffold_10:5016618...5024725
NR annotation: KAJ7374943.1, Dehydrogenase/reductase SDR member 2, mitochondrial [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8WNV7Dehydrogenase/reductase SDR family member 4 OS=Sus scrofa OX=9823 GN=DHRS4 PE=1 SV=2
Q8SPU8Dehydrogenase/reductase SDR family member 4 OS=Bos taurus OX=9913 GN=DHRS4 PE=2 SV=2
Q9GKX2Dehydrogenase/reductase SDR family member 4 (Fragment) OS=Oryctolagus cuniculus OX=9986 GN=DHRS4 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002563 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00106
all species →		adh_shortshort chain dehydrogenaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002347
all species →		FamilyShort-chain dehydrogenase/reductase SDRInterproscan
IPR020904
all species →		Conserved_siteShort-chain dehydrogenase/reductase, conserved siteInterproscan
IPR036291
all species →		Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43943
all species →		DEHYDROGENASE/REDUCTASE (SDR FAMILY) MEMBER 4Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004090
all species →		Molecular Functioncarbonyl reductase (NADPH) activityInterproscan
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K11147DHRS4; dehydrogenase/reductase SDR family member 4EC:1.1.-.-
Peroxisomeko04146deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_005303-T1 global co-expression network
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