Detailed information of OS493_005309-T1 in Lophelia pertusa

Genomic Location: scaffold_10:5073751...5077681
NR annotation: KAJ7374949.1, hypothetical protein OS493_005309 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q62967Diphosphomevalonate decarboxylase OS=Rattus norvegicus OX=10116 GN=Mvd PE=1 SV=2
Q5U403Diphosphomevalonate decarboxylase OS=Danio rerio OX=7955 GN=mvd PE=2 SV=1
Q99JF5Diphosphomevalonate decarboxylase OS=Mus musculus OX=10090 GN=Mvd PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004217 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18376
all species →		MDD_CMevalonate 5-diphosphate decarboxylase C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041431
all species →		DomainMvd1, C-terminalInterproscan
IPR036554
all species →		Homologous_superfamilyGHMP kinase, C-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10977
all species →		DIPHOSPHOMEVALONATE DECARBOXYLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004163
all species →		Molecular Functiondiphosphomevalonate decarboxylase activityInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0019287
all species →		Biological Processisopentenyl diphosphate biosynthetic process, mevalonate pathwayInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_005309-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_005309-T1 global co-expression network
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