Detailed information of OS493_005473-T1 in Lophelia pertusa

Genomic Location: scaffold_11:1671147...1674072
NR annotation: KAJ7365366.1, hypothetical protein OS493_005473 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O58320Glyoxylate reductase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) OX=70601 GN=gyaR PE=1 SV=2
Q8U3Y2Glyoxylate reductase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) OX=186497 GN=gyaR PE=1 SV=1
B1L765Glyoxylate reductase OS=Korarchaeum cryptofilum (strain OPF8) OX=374847 GN=gyaR PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001277 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00389
all species →		2-Hacid_dhD-isomer specific 2-hydroxyacid dehydrogenase, catalytic domainDomainInterproscan
PF02826
all species →		2-Hacid_dh_CD-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006139
all species →		DomainD-isomer specific 2-hydroxyacid dehydrogenase, catalytic domainInterproscan
IPR036291
all species →		Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR006140
all species →		DomainD-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domainInterproscan
IPR050223
all species →		FamilyD-isomer specific 2-hydroxyacid dehydrogenaseInterproscan
IPR029752
all species →		Conserved_siteD-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10996
all species →		2-HYDROXYACID DEHYDROGENASE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016616
all species →		Molecular Functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptorInterproscan
GO:0051287
all species →		Molecular FunctionNAD bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_005473-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_005473-T1 global co-expression network
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