Detailed information of OS493_005479-T1 in Lophelia pertusa

Genomic Location: scaffold_11:1715820...1717888
NR annotation: KAJ7365372.1, DC-STAMP-like protein [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5T197E3 ubiquitin-protein ligase DCST1 OS=Homo sapiens OX=9606 GN=DCST1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009043 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07782
all species →		DC_STAMPDC-STAMP-like proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012858
all species →		DomainDendritic cell-specific transmembrane protein-likeInterproscan
IPR051856
all species →		FamilyCell Surface Receptor and E3 Ligase ProteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21041
all species →		DENDRITIC CELL-SPECIFIC TRANSMEMBRANE PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →		Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_005479-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_005479-T1 global co-expression network
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