Detailed information of OS493_005880-T1 in Lophelia pertusa

Genomic Location: scaffold_12:2065295...2084702
NR annotation: KAJ7339482.1, potassium channel, sub T, member 2 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6ZPR4Potassium channel subfamily T member 1 OS=Mus musculus OX=10090 GN=Kcnt1 PE=1 SV=2
Q9Z258Potassium channel subfamily T member 1 OS=Rattus norvegicus OX=10116 GN=Kcnt1 PE=1 SV=2
Q6UVM3Potassium channel subfamily T member 2 OS=Homo sapiens OX=9606 GN=KCNT2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002912 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07885
all species →		Ion_trans_2Ion channelFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013099
all species →		DomainPotassium channel domainInterproscan
IPR047871
all species →		FamilyCalcium-activated potassium channel slowpoke-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10027
all species →		CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005228
all species →		Molecular Functionintracellular sodium-activated potassium channel activityInterproscan
GO:0005267
all species →		Molecular Functionpotassium channel activityInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0015271
all species →		Molecular Functionoutward rectifier potassium channel activityInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0016021
all species →		Cellular ComponentmembraneInterproscan
GO:0071805
all species →		Biological Processpotassium ion transmembrane transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_005880-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_005880-T1 global co-expression network
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