Detailed information of OS493_005952-T1 in Lophelia pertusa

Genomic Location: scaffold_12:2765598...2783321
NR annotation: KAJ7339552.1, Serine/threonine-protein phosphatase 2A activator [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q28717Serine/threonine-protein phosphatase 2A activator OS=Oryctolagus cuniculus OX=9986 GN=PTPA PE=1 SV=1
Q2KJ44Serine/threonine-protein phosphatase 2A activator OS=Bos taurus OX=9913 GN=PTPA PE=2 SV=1
P58389Serine/threonine-protein phosphatase 2A activator OS=Mus musculus OX=10090 GN=Ptpa PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005388 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01762
all species →		Galactosyl_TGalactosyltransferaseFamilyInterproscan
PF03095
all species →		PTPAPhosphotyrosyl phosphate activator (PTPA) proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037218
all species →		Homologous_superfamilyPTPA superfamilyInterproscan
IPR004327
all species →		FamilyPhosphotyrosyl phosphatase activator, PTPAInterproscan
IPR002659
all species →		FamilyGlycosyl transferase, family 31Interproscan
IPR043170
all species →		Homologous_superfamilyPhosphotyrosyl phosphatase activator, C-terminal lid domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10012
all species →		SERINE/THREONINE-PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT BInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0019211
all species →		Molecular Functionphosphatase activator activityInterproscan
GO:0000159
all species →		Cellular Componentprotein phosphatase type 2A complexInterproscan
GO:0003755
all species →		Molecular Functionpeptidyl-prolyl cis-trans isomerase activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0007052
all species →		Biological Processmitotic spindle organizationInterproscan
GO:0008160
all species →		Molecular Functionprotein tyrosine phosphatase activator activityInterproscan
GO:0006486
all species →		Biological Processprotein glycosylationInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0016758
all species →		Molecular Functionhexosyltransferase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_005952-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_005952-T1 global co-expression network
TOP