Detailed information of OS493_006130-T1 in Lophelia pertusa

Genomic Location: scaffold_13:195726...208149
NR annotation: KAJ7393164.1, hypothetical protein OS493_006130 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q00341Vigilin OS=Homo sapiens OX=9606 GN=HDLBP PE=1 SV=3
Q8VDJ3Vigilin OS=Mus musculus OX=10090 GN=Hdlbp PE=1 SV=1
Q9Z1A6Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004379 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00013
all species →		KH_1KH domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036612
all species →		Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR004088
all species →		DomainK Homology domain, type 1Interproscan
IPR004087
all species →		DomainK Homology domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10627
all species →		SCP160Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_006130-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_006130-T1 global co-expression network
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