Detailed information of OS493_006210-T1 in Lophelia pertusa

Genomic Location: scaffold_13:1091134...1092987
NR annotation: KAJ7393241.1, Caspase, interleukin-1 beta converting enzyme (ICE) ues [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9I9L7Caspase a OS=Danio rerio OX=7955 GN=caspa PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000405 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00656
all species →		Peptidase_C14Caspase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015917
all species →		DomainPeptidase C14A, caspase catalytic domainInterproscan
IPR011600
all species →		DomainPeptidase C14, caspase domainInterproscan
IPR029030
all species →		Homologous_superfamilyCaspase-like domain superfamilyInterproscan
IPR001309
all species →		DomainPeptidase C14, p20 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10454
all species →		CASPASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008234
all species →		Molecular Functioncysteine-type peptidase activityInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0006915
all species →		Biological Processapoptotic processInterproscan
GO:0043525
all species →		Biological Processpositive regulation of neuron apoptotic processInterproscan
GO:0097153
all species →		Molecular Functionobsolete cysteine-type endopeptidase activity involved in apoptotic processInterproscan
GO:0004197
all species →		Molecular Functioncysteine-type endopeptidase activityInterproscan
GO:0006508
all species →		Biological ProcessproteolysisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_006210-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_006210-T1 global co-expression network
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