Gene detail

Detailed information of OS493_006697-T1 in Lophelia pertusa

Genomic Location: scaffold_14:1110758...1123665
NR annotation: KAJ7386688.1, Post-GPI attachment to protein factor 3 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A8WFS8	GPI-specific phospholipase A2-like PGAP3 OS=Danio rerio OX=7955 GN=pgap3 PE=2 SV=1
Q0VFE3	GPI-specific phospholipase A2-like PGAP3 OS=Xenopus tropicalis OX=8364 GN=pgap3 PE=2 SV=1
Q68EV0	GPI-specific phospholipase A2-like PGAP3 OS=Xenopus laevis OX=8355 GN=pgap3 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004946 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04080 all species →	Per1	Per1-like family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007217 all species →	Family	Per1-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13148 all species →	PER1-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006506 all species →	Biological Process	GPI anchor biosynthetic process	Interproscan
GO:0016788 all species →	Molecular Function	hydrolase activity, acting on ester bonds	Interproscan
GO:0031227 all species →	Cellular Component	obsolete intrinsic component of endoplasmic reticulum membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23553	PGAP3, PER1; post-GPI attachment to proteins factor 3	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_006697-T1 global co-expression network