Gene detail

Detailed information of OS493_006721-T1 in Lophelia pertusa

Genomic Location: scaffold_14:1459037...1466736
NR annotation: KAJ7386709.1, hypothetical protein OS493_006721 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

OS493_006721-T1

ATGTGGTTCGATACGAGGTCAACGTTGTTTTTTTTGGCCGTTCATTTCGTTGTCACCCGATGTCAACTTCCTAACCTTCAACCCGGGGACACGGCACCGTCGTTTGCTCTCCAAACGCTAAATGACAGGATTGTTTACAAGAAGAGTAATTCGAATTCTAGAACGCCAACACACCCTGTTATATTCCACTTGTTCACGAGGCGTTCAGCTTTCTTGGAGGCATTGTGGACAAACGAGTCCTCGCTACAAGAGTTCATCGAGTATTCACCAGGGAACACTCATTATGTGTTCATGTCATCTTCTGACTCCAAGTCTATGGAAGACATATTGTGGTTGAGAAAACGTCTTCATAGAGCCATTGACGATTACTTTAAGAGGAAGACAAACCTGTTGCAACAAGATTTAAACACAACTTGCCAGCGATACTCCAGAGGCAGCAGACAAAATGATAACTTTCATCACATTGTGGAAAAGGAACCTTTTTACAAACTGTCACAACTCAAGAAACACCATACATCTAGAACTAATAATTATCGATGCATCAAGAGTTGGGTTGAATTATGGAAGGATAGGCTTCATTTTGTCAGCCTACCAGTGTACGACTTTGGAAACTGGATTCCTTATGCATTAATGCACTGGCCTTGTTTTGGTTCAGGTTGTGCGCTAGCTCAAGTTGTCCTCAAGTCAAACGAAGGTGAAGTAGTACTTGTAGCACAGAGATTGGATGCAAGATATGACTGGCTGCCATCACCGCATAATCTAGTTCACAAACATACTCGCTTTCATATAACTTACTATGGAAATGCTTGCCACTTTAATTCTGAGTGGGAAGAAGAAAGCCAGGAAGATGATAACAAGACACACAAAAAACACAAGACCAAAGCCAAGGAAGGACGTATTGCACTTGTGTCTCCTGGTGGAGACTGTTCTTTATTTACTAAGATTCATTATATGAGTAAGGCAGGAGTTAATGCAGTTCTTATATATCCTGAAGAAGATGAGCCAATCAAAGAACTGAGTTGTGACAGTCATCAATGTTACACACCTCTTCATGTATCAGCGTCAATGATTTCTCACAAAGATGGCATCCACATTAAACACTTGTTGCTTGCTAAAATGAAGCTGTATGTTTCTTACCAGTTTACTCCTCAAGAAAACTATTTTCTTGCTATTGATGGTCAGGGAAAGCTAGCTGAAGTGGGCCTGTTTCTCTTCCCATCAATGAAGTTTATGGCCTATGAGGCAAAGTGGTTTAACTACAAAACAGATCTAATTCACAACTTGACTGGCAGTGCCAGAATAATCCATGTGTTTAACCACACCCTGATGGAAGGAGAGAATGGTGCCGTGAGAACTGTTCACCTTCCACCACTTAAAGAGTTGCAGCTGTACAGAAATGTTGAACTGGACATGTCTTTGTACTGCCCTGGTAAAAGTGATTACTCCTGTCCTCACTGGGATCATCTTGTACACTTGACTGTCTGTTGCGACAAAAAAAGCCCACTCTGTGGGGAGGAGTTGGGCCGGTGGATAACACCATATAGGAGGGCTGTGGGACATTGGTTGACAAACATTACACCTCTGTTACCACTGTTTACATCAGAATCTTGTACTTTACAAATGAAACATCCTTCGTGGGAGAGCGCATGGAAGCCTTCCCTGAATATCAGGCTTTCTGATCACATCAAATTTTCAACACACACATACGGTGGCAGGCGTGAAGATCAGTACAATGTTCCTTACAAGATTGTCAAGTTATTCAGAGGTGGCAAATTCGACAAAAACTACAACAAAAAGTATTTCACCCACACATTGAGAATTCCTTCAGAGACATCACAAGTGAAACTTGTAGCCACAATCAGCGGGCATGGCAGCGATAATAATGGCTGTGCGGAGTTCTGCATCACATCGCACCACTTCATTATAAACGGACATTCAAATGTGAAAGTGTTTAAAAATGCTGCTACTGCCATGGGGTGTGCGAACAGGGTCAGCGAGGGCGGGGTCCCAAATGAACATGGCACGTGGTTGTATGGTAGAGATGGCTGGTGCTGTGGAAAGGATGTTGTACCATGGGTTGTCGATATTACTAAACAAGTGCATGTTGGAGAATACTATAATAAAGTCAAGTACTTTGGTTGGTTTAATGGTAGTGACCCCCACCCTACCCGGGATCCGGGTGAGATAGTTTTGAGATCATATTTGGTGTATTATAAGTCTGTGGAGGATCAGTTTTCTGATGAGGTCTGA

Transcript

OS493_006721-T1

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002154 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09113 all species →	N-glycanase_C	Peptide-N-glycosidase F, C terminal	Domain	Interproscan
PF09112 all species →	N-glycanase_N	Peptide-N-glycosidase F, N terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015197 all species →	Domain	Peptide-N-glycosidase F, C-terminal	Interproscan
IPR014784 all species →	Homologous_superfamily	Copper type II, ascorbate-dependent monooxygenase-like, C-terminal	Interproscan
IPR015196 all species →	Domain	Peptide-N-glycosidase F, N-terminal	Interproscan
IPR053251 all species →	Family	Glycoprotein-specific N-glycanase	Interproscan
IPR008977 all species →	Homologous_superfamily	PHM/PNGase F domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR39319 all species →	SI:DKEY-256H2.1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016715 all species →	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for OS493_006721-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_006721-T1 global co-expression network