Detailed information of OS493_007185-T1 in Lophelia pertusa

Genomic Location: scaffold_15:2842745...2867451
NR annotation: KAJ7380803.1, DNA-directed RNA polymerase III subunit RPC4 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5E9Z7DNA-directed RNA polymerase III subunit RPC4 OS=Bos taurus OX=9913 GN=POLR3D PE=2 SV=1
Q91WD1DNA-directed RNA polymerase III subunit RPC4 OS=Mus musculus OX=10090 GN=Polr3d PE=2 SV=2
P05423DNA-directed RNA polymerase III subunit RPC4 OS=Homo sapiens OX=9606 GN=POLR3D PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005299 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05132
all species →		RNA_pol_Rpc4RNA polymerase III RPC4FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007811
all species →		FamilyDNA-directed RNA polymerase III subunit RPC4Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13408
all species →		DNA-DIRECTED RNA POLYMERASE IIIInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0005666
all species →		Cellular ComponentRNA polymerase III complexInterproscan
GO:0006383
all species →		Biological Processtranscription by RNA polymerase IIIInterproscan
GO:0042797
all species →		Biological ProcesstRNA transcription by RNA polymerase IIIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_007185-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_007185-T1 global co-expression network
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