Detailed information of OS493_007475-T1 in Lophelia pertusa

Genomic Location: scaffold_16:2856834...2860012
NR annotation: KAJ7374374.1, Breast cancer metastasis-suppressor 1-like protein [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A4FV29Breast cancer metastasis-suppressor 1-like protein OS=Bos taurus OX=9913 GN=BRMS1L PE=2 SV=1
Q5ZLL9Breast cancer metastasis-suppressor 1-like protein OS=Gallus gallus OX=9031 GN=BRMS1L PE=2 SV=1
Q5PSV4Breast cancer metastasis-suppressor 1-like protein OS=Homo sapiens OX=9606 GN=BRMS1L PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003628 (this species only)

 Pfam domain
No Pfam domain signature was detected for OS493_007475-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR013907
all species →		FamilySds3-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21964
all species →		BREAST CANCER METASTASIS-SUPPRESSOR 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000122
all species →		Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0042826
all species →		Molecular Functionhistone deacetylase bindingInterproscan
GO:0070822
all species →		Cellular ComponentSin3-type complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_007475-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_007475-T1 global co-expression network
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