Detailed information of OS493_007696-T1 in Lophelia pertusa

Genomic Location: scaffold_17:1219118...1225146
NR annotation: KAJ7365054.1, PtdIns(3,5)P(2) sythesis regulation factor [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5ZIW5Protein VAC14 homolog OS=Gallus gallus OX=9031 GN=VAC14 PE=2 SV=1
Q08AM6Protein VAC14 homolog OS=Homo sapiens OX=9606 GN=VAC14 PE=1 SV=1
A2VE70Protein VAC14 homolog OS=Bos taurus OX=9913 GN=VAC14 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004488 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12755
all species →		Vac14_Fab1_bdVacuolar 14 Fab1-binding regionRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR026825
all species →		FamilyVacuole morphology and inheritance protein 14Interproscan
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan
IPR021133
all species →		RepeatHEAT, type 2Interproscan
IPR011989
all species →		Homologous_superfamilyArmadillo-like helicalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16023
all species →		TAX1 BINDING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000306
all species →		Cellular Componentobsolete extrinsic component of vacuolar membraneInterproscan
GO:0006661
all species →		Biological Processphosphatidylinositol biosynthetic processInterproscan
GO:0010008
all species →		Cellular Componentendosome membraneInterproscan
GO:0070772
all species →		Cellular ComponentPAS complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_007696-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_007696-T1 global co-expression network
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