Detailed information of OS493_007697-T1 in Lophelia pertusa

Genomic Location: scaffold_17:1226575...1228139
NR annotation: KAJ7365055.1, PtdIns(3,5)P(2) sythesis regulation factor [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5ZIW5Protein VAC14 homolog OS=Gallus gallus OX=9031 GN=VAC14 PE=2 SV=1
Q80WQ2Protein VAC14 homolog OS=Mus musculus OX=10090 GN=Vac14 PE=1 SV=1
Q80W92Protein VAC14 homolog OS=Rattus norvegicus OX=10116 GN=Vac14 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004488 (this species only)

 Pfam domain
No Pfam domain signature was detected for OS493_007697-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR026825
all species →		FamilyVacuole morphology and inheritance protein 14Interproscan
IPR011989
all species →		Homologous_superfamilyArmadillo-like helicalInterproscan
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16023
all species →		TAX1 BINDING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000306
all species →		Cellular Componentobsolete extrinsic component of vacuolar membraneInterproscan
GO:0006661
all species →		Biological Processphosphatidylinositol biosynthetic processInterproscan
GO:0010008
all species →		Cellular Componentendosome membraneInterproscan
GO:0070772
all species →		Cellular ComponentPAS complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_007697-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_007697-T1 global co-expression network
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