Detailed information of OS493_007785-T1 in Lophelia pertusa

Genomic Location: scaffold_17:2639279...2647013
NR annotation: KAJ7365136.1, tRNA-dihydrouridine(20) synthase [NAD(P)+]-like protein [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9NX74tRNA-dihydrouridine(20) synthase [NAD(P)+]-like OS=Homo sapiens OX=9606 GN=DUS2 PE=1 SV=1
Q9D7B1tRNA-dihydrouridine(20) synthase [NAD(P)+]-like OS=Mus musculus OX=10090 GN=Dus2 PE=1 SV=1
O74731tRNA-dihydrouridine(20) synthase [NAD(P)+] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dus2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003845 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00035
all species →		dsrmDouble-stranded RNA binding motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013785
all species →		Homologous_superfamilyAldolase-type TIM barrelInterproscan
IPR052582
all species →		FamilytRNA-dihydrouridine synthase-likeInterproscan
IPR044463
all species →		DomainDUS2, double-stranded RNA binding domainInterproscan
IPR014720
all species →		DomainDouble-stranded RNA-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45936
all species →		TRNA-DIHYDROURIDINE(20) SYNTHASE [NAD(P)+]-LIKEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0002943
all species →		Biological ProcesstRNA dihydrouridine synthesisInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0017150
all species →		Molecular FunctiontRNA dihydrouridine synthase activityInterproscan
GO:0000049
all species →		Molecular FunctiontRNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_007785-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_007785-T1 global co-expression network
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